If you are happy with Suzuki, I'd probably stick with them. Twin DF350's "should" get the job done, but from the 33'+ boats I've either been on or seen the performance specs of, I think triple 300's is a better option. And not just for speed, you should see better mpg with three engines working easy vs two hard.
Instead of twin Yamaha 425's, I'd definitely go triple F300's - or even better, Merc 300's
. More power, similar or less weight, proven platform and cheaper to go that route. The Mercury 450R's are from their racing line and meant for go-fast type boats rather than pushing big heavy boats and probably not the best option; again for the cost, you could probably get triple 300's for less. Just to mess with your head, have you thought about diesel inboards? I was on a new 36' Eaglecraft last summer with new Volvo D4's and DPS outdrives and it was pretty slick, especially with all that room at the back. It definitely made me reconsider what power I'd put on my boat if I was in your shoes.
As someone else said above, I'd install a bow thruster and forgo the joystick. Have you even seen a boat docking with a joystick? It is a loud and violent process with the engines shifting in and out of gear and revving up and down. The whole marina comes out to watch the show! That said, I have heard that the DF350's work better with joysticks than other outboards due to the dual props.
Definitely go with the Burnewiin mounts. I put mine on my boat six years ago (dealt directly with company as there were no dealers, they were great BTW) and they've been one of the best upgrades. This past winter I added a mount for a HD trap hauler. My buddy installed a few of the mounts in the hold of his boat so when he takes his downriggers, bbq, etc. off he can have them secured down below deck, something to think about.
For fuel capacity, I'd go with enough that you can have ~12 hrs running at cruising speed PLUS 20 - 25% reserve.
One of my wife and I's favorite conversations is planning our dream boat for when we retire and what we'd put on it. We're a few years away yet, but have been on most of the 30'+ aluminum boats to see what we like / don't like (haven't been on a Liquid Metal though). I've started keeping a "build list" of things we like and can PM it to you if you want. Appreciate that everyone's custom build is going to be different to fit their planned use case, so it may not be of interest to you.